MRIQC: individual T1w report

Summary

  • BIDS filename: sub-4072_ses-1_T1w.
  • Date and time: 2022-11-03, 02:21.
  • MRIQC version: 0.16.1.

Visual reports

Zoomed-in (brain mask)
Background noise

Other

cjv0.5507652252938676
cnr2.4079160282152303
efc0.5217337097457386
fber1882.5852665264101
fwhmavg4.262186666666667
fwhmx4.08804
fwhmy4.9502
fwhmz3.74832
icvscsf0.19823931181162907
icvsgm0.41231391874784684
icvswm0.3894467694405241
inumed1.966001033782959
inurange0.8785492539405824
qi10.0
qi20.010734491372310572
rpvecsf32.018504654099296
rpvegm16.10829304721467
rpvewm20.40571372611862
sizex176
sizey256
sizez256
snrcsf3.15305107983547
snrgm9.941516248919548
snrtotal10.634163624667805
snrwm18.807923545248393
snrdcsf40.08181485569936
snrdgm87.66230415954966
snrdtotal80.40552243553263
snrdwm113.47244829134884
spacingx1.0
spacingy1.0
spacingz1.0
summarybgk13.68360670431542
summarybgmad5.773722296349076
summarybgmean12.882688887860835
summarybgmedian11.58223444595933
summarybgn2838671.0
summarybgp053.8607448153197765
summarybgp9526.92449862509966
summarybgstdv7.616044887279003
summarycsfk0.01979350687221393
summarycsfmad108.53104713094103
summarycsfmean379.001571437927
summarycsfmedian353.2413647547364
summarycsfn15584.0
summarycsfp05234.69971307739615
summarycsfp95589.4467683101072
summarycsfstdv112.02800784587097
summarygmk0.04368579735519962
summarygmmad75.70544493747366
summarygmmean776.7420752105508
summarygmmedian772.5686092395335
summarygmn13418.0
summarygmp05655.5158621931449
summarygmp95913.9893704093993
summarygmstdv77.70845018448004
summarywmk0.38173882291888717
summarywmmad49.57437419968689
summarywmmean999.5982115359634
summarywmmedian1000.0336222499609
summarywmn174382.0
summarywmp05909.3564766310155
summarywmp951086.514306113124
summarywmstdv53.170715654768905
tpmoverlapcsf0.15058504045009613
tpmoverlapgm0.4326227903366089
tpmoverlapwm0.4715866148471832
wm2max0.7394346246816081
AcquisitionMatrixPE246
AcquisitionNumber1
AcquisitionTime14:29:35.647500
BaseResolution256
BodyPartExaminedBRAIN
CoilCombinationMethodAdaptive Combine
ConsistencyInfoN4_VE11C_LATEST_20160120
ConversionSoftwaredcm2niix
ConversionSoftwareVersionv1.0.20211006
Dcm2bidsVersion2.1.7
DeviceSerialNumber67034
DwellTime3e-06
EchoTime0.00169
FlipAngle7
ImageOrientationPatientDICOM[0.0244642, 0.970633, 0.239318, 0.0868374, 0.236421, -0.967762]
ImageOrientationTextSag>Tra(-4.5)>Cor(2.5)
ImageType['ORIGINAL', 'PRIMARY', 'OTHER', 'ND', 'NORM', 'MEAN']
ImagingFrequency123.259
InPlanePhaseEncodingDirectionDICOMROW
InstitutionAddressFairbanks 710,Chicago ,Chicago,US,60611
InstitutionNameNU Tuna
InstitutionalDepartmentNameDepartment
InversionTime1.16
MRAcquisitionType3D
MagneticFieldStrength3
ManufacturerSiemens
ManufacturersModelNamePrisma_fit
MatrixCoilModeGRAPPA
ModalityMR
NumberOfAverages3
ParallelReductionFactorInPlane2
PartialFourier0.75
PatientPositionHFS
PercentPhaseFOV100
PercentSampling96
PhaseEncodingSteps185
PhaseResolution0.96
PixelBandwidth650
ProcedureStepDescriptionfMRI_STUDIES^MITTAL
ProtocolNametfl_epinav_ME3_1mm_p2
PulseSequenceDetails%CustomerSeq%\tfl_mgh_epinav_ABCD
ReceiveCoilActiveElementsHC1-7;NC1,2
ReceiveCoilNameHeadNeck_64
ReconMatrixPE256
RefLinesPE36
RepetitionTime2.17
SAR0.029521
ScanOptionsIR\PFP\WE
ScanningSequenceGR\IR
SequenceNametfl3d3_16ns
SequenceVariantSK\SP\MP\OSP
SeriesDescriptiontfl_epinav_ME3_1mm_p2 RMS
SeriesNumber23
ShimSetting[2638, 5406, -7488, 254, -85, -1085, 159, -166]
SliceThickness1
SoftwareVersionssyngo MR E11
SpoilingStateTrue
StationNameMRC35427
TxRefAmp218.386
WipMemBlockPrisma_epi_moco_navigator_ABCD_tfl.prot
md5sum5f3b2602d0c83ed52d784f4ce33c308d
softwaremriqc
version0.16.1
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For details on the IQMs (image quality metrics) and further information on the enclosed plots, please read the documentation.